Restore a database

It is possible to load all information from a dumped loqusdb instance. This command just wraps the mongo command mongo restore Loqusdb is shipped with a database instance that includes structural variants from ~740 1000G individuals. Those have been called with manta, tiddit and CNVnator and the calls are merged with svdb. If no file is pointed at loqusdb restore will use this database as default.

Usage: loqusdb restore [OPTIONS]

  Restore the database from a zipped file.

  Default is to restore from db dump in loqusdb/resources/

Options:
  -f, --filename PATH  If custom named file is to be used
  --help               Show this message and exit.